Overview of the current status of the laminr package and its dependencies. Can be useful for debugging.
Details
Provides information that can be useful for debugging. To run the function
when an error occurs, set
options(error = function() { print(laminr::laminr_status() }). Note that
this should be used with some caution as it will print the status whenever
any error occurs.
Examples
laminr_status()
#>
#> ── laminr 1.2.0.9000 ───────────────────────────────────────────────────────────
#>
#> ── Environment Variables ──
#>
#> `LAMINR_LAMINDB_VERSION`: "release"
#> `LAMINR_LAMINDB_OPTIONS`: "bionty"
#>
#> ── Settings ──
#>
#> ✖ Not connected to an instance
#>
#> ── Python 3.11.13 (main, Jul 11 2025, 22:43:55) [Clang 20.1.4 ] ──
#>
#> ✔ lamindb v1.13.0
#> ✔ lamin_cli v1.8.1
#> ✔ lamin_utils v0.15.0
#> ✔ lamindb_setup v1.12.0
#> ✔ bionty v1.8.1
#> ✔ wetlab v1.6.1
#> ✖ clinicore
#> ✖ cellregistry
#> ✖ omop
#> ✔ scipy v1.16.2
#> ✔ numpy v2.3.4
#> ✔ pandas v2.3.3
#>
#> ℹ Run `reticulate::py_config()` and `reticulate::py_require()` for more
#> information